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Autodiff runtime option

Reinhard Resch requested to merge autodiff-runtime-option into develop

This branch eliminates all instances of USE_AUTODIFF and USE_SPARSE_AUTODIFF. Instead automatic differentiation can enabled at runtime by adding "use automatic differentiation;" inside the control data section of the input file. When this is finished, it will solve issue #200 (closed).

Edited by Reinhard Resch

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